Last updated on 2025-08-20 05:48:33 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.99 | 264.24 | 277.23 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.92 | 228.23 | 239.15 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 315.74 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.41 | 283.28 | 297.69 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.83 | 270.65 | 283.48 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 191.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.447, system: 0.032, elapsed: 2.024 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.886, system: 0.069, elapsed: 12.846 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.767, system: 0.191, elapsed: 5.555 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.002, elapsed: 0.203 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.999, system: 0.324, elapsed: 21.754 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.447, system: 0.031, elapsed: 2.190 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.950, system: 0.053, elapsed: 12.944 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.287 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.702, system: 0.152, elapsed: 5.432 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.984, system: 0.268, elapsed: 21.921 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.028, elapsed: 2.286 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.995, system: 0.060, elapsed: 14.990 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.703, system: 0.162, elapsed: 5.551 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.231 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.141, system: 0.211, elapsed: 1.075 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.358, system: 0.498, elapsed: 25.334 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.473, system: 0.038, elapsed: 1.982 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.957, system: 0.062, elapsed: 13.303 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.453 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.705, system: 0.166, elapsed: 9.304 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.362 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.159, system: 0.420, elapsed: 24.021 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.292, system: 0.731, elapsed: 50.765 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.583, system: 0.046, elapsed: 2.240 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.003, system: 0.059, elapsed: 12.263 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.616, system: 0.183, elapsed: 5.515 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.213 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.085, system: 0.322, elapsed: 21.280 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.032, elapsed: 1.925 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.080, system: 0.070, elapsed: 14.454 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.587, system: 0.148, elapsed: 4.771 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.215 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.086, system: 0.292, elapsed: 22.433 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.527, system: 0.033, elapsed: 1.959 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.094, system: 0.055, elapsed: 12.877 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.010, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.583, system: 0.157, elapsed: 5.505 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.014, elapsed: 0.264 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.079, system: 0.237, elapsed: 0.985 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.290, system: 0.541, elapsed: 22.784 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.464, system: 0.026, elapsed: 2.116 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.027, system: 0.045, elapsed: 19.980 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.449 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.618, system: 0.157, elapsed: 8.630 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.378 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.395, system: 0.444, elapsed: 20.218 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.504, system: 0.708, elapsed: 53.127 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64