Last updated on 2025-10-05 05:49:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.80 | 251.42 | 265.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.90 | 275.31 | 286.21 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 193.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 173.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/133s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.057, elapsed: 2.047 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.241, system: 0.210, elapsed: 12.951 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.018, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.925, system: 0.276, elapsed: 6.398 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.008, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.638, system: 0.600, elapsed: 22.703 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.621, system: 0.074, elapsed: 2.156 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.342, system: 0.258, elapsed: 14.043 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.020, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.888, system: 0.225, elapsed: 7.864 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.005, elapsed: 0.356 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.749, system: 0.611, elapsed: 25.648 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.612, system: 0.057, elapsed: 3.401 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.115, system: 0.146, elapsed: 13.106 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.959, system: 0.305, elapsed: 6.389 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.011, elapsed: 0.304 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.283, system: 0.284, elapsed: 1.717 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.971, system: 0.846, elapsed: 26.325 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.788, system: 0.106, elapsed: 3.390 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.397, system: 0.345, elapsed: 16.613 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.343 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.719, system: 0.179, elapsed: 6.280 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.257 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.405, system: 0.479, elapsed: 21.328 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.308, system: 1.163, elapsed: 49.423 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.522, system: 0.053, elapsed: 1.692 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.155, system: 0.233, elapsed: 12.066 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.016, elapsed: 0.382 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.711, system: 0.265, elapsed: 6.011 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.007, elapsed: 0.252 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.265, system: 0.595, elapsed: 21.094 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.731, system: 0.079, elapsed: 2.677 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.269, system: 0.269, elapsed: 14.008 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.017, elapsed: 0.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.240, elapsed: 5.409 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.006, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.635, system: 0.645, elapsed: 23.451 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.699, system: 0.069, elapsed: 2.370 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.175, system: 0.287, elapsed: 11.231 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.014, elapsed: 0.223 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.271, elapsed: 5.071 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.017, elapsed: 0.286 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.078, system: 0.270, elapsed: 1.035 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.587, system: 0.971, elapsed: 21.089 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.041, elapsed: 2.722 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.905, system: 0.119, elapsed: 12.513 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.402 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.587, system: 0.173, elapsed: 6.765 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.309 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.020, system: 0.438, elapsed: 16.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.067, system: 0.816, elapsed: 40.024 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64