CRAN Package Check Results for Package snpReady

Last updated on 2025-05-21 05:52:04 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.6 7.88 75.47 83.35 NOTE
r-devel-linux-x86_64-debian-gcc 0.9.6 6.24 58.03 64.27 NOTE
r-devel-linux-x86_64-fedora-clang 0.9.6 130.00 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9.6 140.71 NOTE
r-devel-windows-x86_64 0.9.6 10.00 98.00 108.00 NOTE
r-patched-linux-x86_64 0.9.6 7.35 71.90 79.25 NOTE
r-release-linux-x86_64 0.9.6 8.27 72.20 80.47 NOTE
r-release-macos-arm64 0.9.6 45.00 NOTE
r-release-macos-x86_64 0.9.6 84.00 NOTE
r-release-windows-x86_64 0.9.6 11.00 99.00 110.00 NOTE
r-oldrel-macos-arm64 0.9.6 44.00 NOTE
r-oldrel-macos-x86_64 0.9.6 70.00 NOTE
r-oldrel-windows-x86_64 0.9.6 12.00 104.00 116.00 NOTE

Check Details

Version: 0.9.6
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Italo Granato <italo.granato@gmail.com>’ File 'R/snpReady-internal.R' sets .Random.seed. This is usually neither needed nor wanted. Found the following \keyword or \concept entries which likely give several index terms: File ‘maize.hyb.Rd’: \keyword{datasets;} File ‘maize.line.Rd’: \keyword{datasets;} Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.9.6
Check: Rd files
Result: NOTE checkRd: (-1) maize.line.Rd:9: Lost braces in \itemize; meant \describe ? checkRd: (-1) maize.line.Rd:10: Lost braces in \itemize; meant \describe ? checkRd: (-1) maize.line.Rd:11: Lost braces in \itemize; meant \describe ? checkRd: (-1) maize.line.Rd:12: Lost braces in \itemize; meant \describe ? checkRd: (-1) raw.data.Rd:26: Lost braces; missing escapes or markup? 26 | \item{call.rate}{\code{numeric}. Threshold for removing marker by missing genotype rate. SNP with \code{call rate} below threshold are removed from dataset. Must be between {0, 1}} | ^ checkRd: (-1) raw.data.Rd:28: Lost braces; missing escapes or markup? 28 | \item{maf}{Threshold for removing SNP by minor allele frequency. Must be between {0, 1}} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64