a39a1264bfe0ce20d091843749a6a4e8 *DESCRIPTION
e0d9090a0379aa09c2f2ff1a4e325891 *NAMESPACE
eed79083e8d19f5ee3b593ba533fd663 *R/CCT.R
2f7058e56651b5e4048157a89f287668 *R/DenseGRM.R
47d31b7cf11eeccd00b214914dc60ba8 *R/GRAB_Marker.R
0186c934baa5559c1dfec245b30c6eda *R/GRAB_Null_Model.R
c35ef7d2349397a0abba795e9a40dd99 *R/GRAB_Region.R
c322f26ec43cd924d5bf85e91a5b0c85 *R/GRAB_Simu.R
5e0fe7b82e7c27e374c3861df99e7f1f *R/Geno.R
b225c7f08c9fb8b96ba49b5ee47128cb *R/POLMM.R
0fe116fc455637617634c4ac3838eb77 *R/PairwiseIBD.R
eeb604e3f8b7c252c298b9431450b4ff *R/RcppExports.R
07a537b1c18ae5a938cf25496d742602 *R/SAGELD.R
dda3dff5fe938f46a53e16d51616cac0 *R/SPACox.R
3cf37477f6209bcd12a305e0a55c7d02 *R/SPAGRM.R
6eabf7452bbe40614b362332f022f26f *R/SPAmix.R
f074bf4055dda52296a6f2e2bf3830c0 *R/SparseGRM.R
eb4e4a63fe20f2a6fa00251c755ff35a *R/Util.R
f9b96994ab770d2fc8085eb375b336f4 *R/WtCoxG.R
2022aeb6e152297196d41d67f6b186b3 *R/control.R
2de05aef45cd0190c526559136b75f2b *R/formula.R
4b490b2586d2fb8856618e6a145b8bb8 *R/zzz.R
bf3eb9705b5dd6ffb2e7e3ed16338b8d *README.md
b724d5e25d7442f247b47de22b3d9369 *inst/PairwiseIBD/PairwiseIBD.txt
a2c636c1f2ca054913ebea9384039129 *inst/PairwiseIBD/temp/README.txt
0e208b1e4c3ceef5271b3e1e744c3001 *inst/SparseGRM/SparseGRM.txt
b6c7befadf608ea64ddc7e3d156f2a8e *inst/SparseGRM/temp/README.txt
0d32c38035ce730bd8913edffbe380ba *inst/extdata/IDsToInclude.txt
ae9e6682b5ba40a590a938203c726c52 *inst/extdata/RangesToInclude.txt
49ef79a6e57f7275c109b742540aaf8e *inst/extdata/ResidMat.txt
75c4c8a36bdfbfd3aedf776062b427f7 *inst/extdata/example_10-members.kin.txt
000ddcd30cca4a405c8139662fd7816e *inst/extdata/example_20-members.kin.txt
bc779a33e0f05d5ca06d06ad28c3356a *inst/extdata/example_4-members.kin.txt
05382e65356ee18b0a96e7af4d6d687c *inst/extdata/example_n1000_m236.IDsToInclude
9e76a1b0e489111df8ed09c813e04b0d *inst/extdata/example_n1000_m236.bed
70cd9378db05e4b0db76c494478bd552 *inst/extdata/example_n1000_m236.bgen
87668c88ee35dc02dbcf0043417e328a *inst/extdata/example_n1000_m236.bgen.bgi
d82badd5a2fded40ded1c3af1dd09f96 *inst/extdata/example_n1000_m236.bim
407d1a3b4845fef4e0d8c3f603ec66b3 *inst/extdata/example_n1000_m236.fam
690ad9c55a88d81e9889ff082f072de5 *inst/extdata/example_n1000_m236.sample
fd20b8464dad192dc2231b2685c52ad0 *inst/extdata/simuBGEN.bgen
6c26cd41efd1a237833a840610f7d78e *inst/extdata/simuBGEN.bgen.bgi
af1323d7a700ea716f0ddece08cb7ed3 *inst/extdata/simuBGEN.sample
a3125873bcc2c3a4a514983628468e74 *inst/extdata/simuGENO.IDsToInclude
3b14f63689ebc8dc240f433df8de7d89 *inst/extdata/simuLongPHENO.txt
42895b062736f59009ec830586da34ff *inst/extdata/simuPHENO.txt
6f363dc193415a617fddf18fd308885f *inst/extdata/simuPLINK.bed
05f5548f0e9e01ed3142bc994e963ff2 *inst/extdata/simuPLINK.bim
6e6b8c65e83dea44a709049da528b695 *inst/extdata/simuPLINK.fam
abaaca337c43cce7f24a1631222771c1 *inst/extdata/simuPLINK_RV.bed
194d3b0572e6821cd2deac065327c667 *inst/extdata/simuPLINK_RV.bim
6e6b8c65e83dea44a709049da528b695 *inst/extdata/simuPLINK_RV.fam
cea7035284179ee09df37b90af6dd8d2 *inst/extdata/simuPLINK_RV.group
6bd7b85e00baf3f5bcde5ddb787ab6af *inst/extdata/simuRAW.raw.gz
4e2b88c5830dfd8ee2e72ae25dd27df3 *inst/extdata/simuRefAf.txt
abd9acdc7154e4047a34cc49cf0fa3b0 *inst/results/README.txt
482027274f4c597a7252fb57f44aa9b0 *inst/results/objPOLMMFile.RData
984883aea39fa7d77c41835305254e42 *man/Batcheffect.Test.Rd
369cdc5f41d23dcedf41813a2f461077 *man/CCT.Rd
f85ce690d4f3c995b9dab5a03c80c82b *man/GRAB.Marker.Rd
07139f18ff5563d57b91acb14b0fa0be *man/GRAB.NullModel.Rd
2d94cddc077f262b858c0b7746431423 *man/GRAB.POLMM.Rd
57dceaf6df74fa3fa6f1b16d48cc8eec *man/GRAB.ReadGeno.Rd
422dd19f5383915df70c4b706f634540 *man/GRAB.Region.Rd
61203e8c41ce6e087b7b4c2cf12cda4b *man/GRAB.SAGELD.Rd
9f49410535624c7820ca67902e246b4d *man/GRAB.SPACox.Rd
f3645742bef8ca6d05a380ba16519a10 *man/GRAB.SPAGRM.Rd
5de3c0706d0d840094ef4d8438ceea21 *man/GRAB.SPAmix.Rd
84bd6c532c0502d725663ae3238cad5f *man/GRAB.SimuGMat.Rd
208d8f90fca643095ea2b3c1f0571c8e *man/GRAB.SimuGMatFromGenoFile.Rd
432d8a485382d0b9dd87ac8bc9e2d375 *man/GRAB.SimuPheno.Rd
c2c942f7d6b67bb9273f0e614f69c467 *man/GRAB.SimubVec.Rd
d7bafab21e97acd5390593b6d4a899ce *man/GRAB.WtCoxG.Rd
85842e972de9c11f44a1a3faf2f851cf *man/GRAB.getGenoInfo.Rd
7e7be353bbd6421964091a8d3ddeae13 *man/GRAB.makePlink.Rd
0a2ee3dec90a5b675419c253965e761b *man/SAGELD.NullModel.Rd
791a10db5cd981ed1f66690031eee10b *man/SPAGRM.NullModel.Rd
9ca1ff1b8fffef2ec0490959f2e3bba2 *man/TestforBatchEffect.Rd
621d698fc3fb9adc7350243c4115a5a7 *man/checkIfSampleIDsExist.Rd
d12b82d99dd5cebe216cdba1d7099c22 *man/getDenseGRM.Rd
43085db87970555a69ae4e392e35a9b8 *man/getSampleIDsFromBGEN.Rd
31f8b146cc96c07d669e400807f90ba3 *man/getSparseGRM.Rd
f0d4518d31ac7a58c2ceaa203a4e3195 *man/getTempFilesFullGRM.Rd
0113591ca5b1faa6768580bb6667d058 *man/getVersionFromBGEN.Rd
e194957eb0f2c1c2dce2e2c3a3bd83db *man/handleFormula.Rd
0d5b04267867e18d6381c6cdf4fa5820 *man/makeGroup.Rd
3c9bdf75d0df6b7926ff5d917479344f *man/setDenseGRM.Rd
136826932c2c156bb18b9764a4054515 *src/BGEN.cpp
8648c3b077c2b0c9549724a4468acc3a *src/BGEN.h
bab82c72b22932a82163331825e6eed5 *src/DenseGRM.cpp
f51387efa99a271babda119840feb4da *src/DenseGRM.h
6b504a8e611c13b28bfd623bc1c0139a *src/Main.cpp
f4b20096933e5b36add27fc5e676291e *src/Makevars
999aeb42b43cae65f7ed9951294c5b1a *src/PLINK.cpp
453dcfa3ed5652704eaf76da7cc884fb *src/PLINK.h
43563a4d159b0bf56ca06a5036b98358 *src/POLMM.cpp
fd1a91b65de62325a5235ff6e5a53187 *src/POLMM.h
7a5860e0247f5cb2358089e936415f2b *src/RcppExports.cpp
9838efe3a3636b3fe4ecf5414d238aa1 *src/SAGELD.cpp
2d6097aed2116bd42a4ee26d9f6a861e *src/SAGELD.h
51d83745bbfd2d597c5fe26b46c3a816 *src/SPACox.cpp
9615c762ef74646943f7d922a930980d *src/SPACox.h
dcd8a6e445e9421af6fb718ca59f7e2e *src/SPAGRM.cpp
fc3e3f93f962973b74f240e809b3f978 *src/SPAGRM.h
4ba06bf963fd4812e874168527495968 *src/SPAmix.cpp
16013ccfbdffaed4c74d768d4c659b75 *src/SPAmix.h
91624eacdcde6252f6b829f8849d099e *src/UTIL.cpp
a1ca3f57db81f8343fb5dc5760cd20b3 *src/UTIL.h
a25b92cbc4cba4c13f59ea48caa24358 *src/WtCoxG.cpp
944390435d01b0b387c225abec66ffa1 *src/WtCoxG.h
fa47d99054e5d634192feefbce956c1b *src/approxfun.h
