e91adbc19802baab19b752f106c83fd5 *DESCRIPTION
5fbc27ae5ccbb6372086e4f2e3c21a9a *NAMESPACE
aa82965fd163b2be5052deeda317d925 *R/LipidMS.R
e73684936c7cb897ae2527c5c342c1ee *R/LipidMSapp.R
d9650cf839a5d006a57c3ad73e75078c *R/additionalFunctions.R
266a75b0ccd97977d5743130712451a5 *R/dataProcessing.R
31d5bf02d5b14ba435a9c82dc9d65161 *R/idFunctionsNeg.R
814694884c66bb2649fc47233b148531 *R/idFunctionsPos.R
3bb6b741ec676a4fafb2d59c2e0d2ccc *R/internal.R
3c1f8ddef364ddce9fac714091ea3a75 *R/internalProcessing.R
8ccea6f59c4a2f84e4ca6150babc1555 *R/internaldbs.R
a4bae17442c0d3901ddf9260a32595fa *R/msbatchAnnotationFunctions.R
b09bc906eb9986b2dc8bd86edcd067f5 *R/subfunctionsIdentification.R
9da39f89845dc39556014d173770843c *R/utils.R
a0d7875a2b93bbc790d359a04f47e685 *README.md
5454d8727080a4e3c26e0fae8a1364ac *build/vignette.rds
e23154e53433f94b0266d8162f67cac2 *data/CEdb.rda
b07de3672dc7d87e17e5163dbaeb2f29 *data/acylcerdb.rda
ede07584a3d0dead6de15c2b4b1cd9fc *data/adductsTable.rda
0568a959abdf387d33434ccc6b43c8ff *data/baconjdb.rda
3357df0825258895c5139b3ba42c7f36 *data/badb.rda
bec3dce4539f65e5ecd5bf9d633bc384 *data/carnitinesdb.rda
c0d73d37f15475d04acc4f4bd8077e09 *data/cerPdb.rda
8a42e991a28a8fc94d7a2fa354cf4a5e *data/cerdb.rda
df411845916523e5694b8dd055c6b184 *data/cldb.rda
02a980ea93ab29b614bda3f0d14b7264 *data/confLevels.rda
6e94e4ee8f7046c8303c6763b473a426 *data/dgdb.rda
80b01bd847602dbb3efc11aeea175c91 *data/fadb.rda
bf8146f2ab052d1b0f910ad60a3bc443 *data/fahfadb.rda
4597d64641e9a315b051d7a092264218 *data/hfadb.rda
7a5dda8189cb621b80ae6612769c6c32 *data/lysopadb.rda
8e5dc9e352d63253e77ba2e4556d3c85 *data/lysopaodb.rda
913707e665449672ee61d078883b5d92 *data/lysopcdb.rda
7f04d3955c6b54767141b012ee77a070 *data/lysopcodb.rda
681ef344bff546941f372036a059606d *data/lysopcpdb.rda
860bae46096d799b0a1c7c8043e1a63b *data/lysopedb.rda
cb189b64eeb670449358b40aa735243d *data/lysopeodb.rda
d9435ece26aaa13c3ca8d6717d52ca2d *data/lysopepdb.rda
ae4147f9ff84f08169ce2aed5aea2291 *data/lysopgdb.rda
02385c76817dfeb2aff4bbe35a59352e *data/lysopidb.rda
4d7f9e1eb585f32ebebdaa3c5b227667 *data/lysopsdb.rda
3fe5fc8899599101fb8410684834d4bb *data/mgdb.rda
e78c10e49111cb3be8b2f7a9698af92f *data/nlsphdb.rda
7beac9b39779769302fe6b0376b0e707 *data/padb.rda
d358a076cfd62b4a62c76c65f1ad6c46 *data/pcdb.rda
ceaa16e4f78b5aedbe30051452f6b907 *data/pcodb.rda
fbb3056b8d310d22174c6d5bec87f08b *data/pcpdb.rda
5341b91b113e12eb31bcd9ef83e79132 *data/pedb.rda
5f95eb23c3c5e039dab256db0a7d261a *data/peodb.rda
d7a197e538651d3b6d94ccb2e5556dcb *data/pepdb.rda
b23cf396bd5a189ada1e413e3c41cde3 *data/pgdb.rda
a64c1b1a917aa64504b88b4067269488 *data/pidb.rda
02d40d36fd8e727f70eff07de94b82fc *data/psdb.rda
6a138612320083e63866d82ef2417358 *data/smdb.rda
2a1f1a52ec91a41f60a104fb79f65877 *data/sphPdb.rda
67c9ba61966eac5987ceb1fcfda6e80d *data/sphdb.rda
d5ceb31d544b968e7cf01b91717be156 *data/tgdb.rda
82ed12286c68969ded0891ec1febbb5d *inst/LipidMSapp/app.R
008e1aec892ada309b7b63baa94aa686 *inst/LipidMSapp/www/iconohorizontal.png
03bdfd8e4a9ac3b490a5330e77285272 *inst/LipidMSapp/www/info_dataImport.png
c37601d38f19967e08c791b8fce5ec61 *inst/LipidMSapp/www/info_manualFilter.png
24152a13388f420a9390ba251527635e *inst/LipidMSapp/www/info_manualPrediction.png
8d8dc41812b87fa63f1792019b02c319 *inst/LipidMSapp/www/legend_manualFilter.png
518bf05df1222df021fa2c7cf5c6e06b *inst/LipidMSapp/www/legend_manualPrediction.png
6514127af2b27b7ff5b999672e2e785c *inst/doc/vignette.R
c483d602186016e2424979ce09b93fef *inst/doc/vignette.Rmd
2bac6f212bbd9ab667c12a5bf1280d84 *inst/doc/vignette.html
c8b8cdbf405637499d7d1bc3e2853c31 *man/CEdb.Rd
b0ecd88bb72b00567e4e75edadd249cf *man/LipidMSapp.Rd
0aada4b3a930e8be340aca4358b5dcbe *man/MassAcylCer.Rd
eb9faf2faafe4e2670d61e3abd3a8b9b *man/MassCE.Rd
0d870e5de93c501e4426dc26c973fe53 *man/MassCL.Rd
23add3231f00ba4bf964b08ea124d1cb *man/MassCarnitines.Rd
983ef567fd4ac6e255ceb1915e155bcd *man/MassCer.Rd
a4bb7af388cc46dd38c8c09ed8bd4036 *man/MassCerP.Rd
6e1991b046e5d9c914967e19e7a7b7f4 *man/MassDG.Rd
0b81be29968a45960dcda5ba57198f19 *man/MassFA.Rd
9c5b5c5c6a9790b0fa7172678fd00e6e *man/MassFAHFA.Rd
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d750e72f0d835625f02bc980730453d2 *man/MassHFA.Rd
820250ce905a75ae20f2bddc01b9b615 *man/MassLysoPA.Rd
49fec2176556b16f140393ff1e5f7c21 *man/MassLysoPAo.Rd
5f87f46b28fd9a867bd91adb2ff00434 *man/MassLysoPC.Rd
a95767eac4575a9831c19f8454b8b7fe *man/MassLysoPCo.Rd
fb212c6e988c82531331b6f0977783b8 *man/MassLysoPCp.Rd
76c52c53bae6e53f4cad946edfb23ac9 *man/MassLysoPE.Rd
bd41fc6ce53bf072c0fecd9862127a1f *man/MassLysoPEo.Rd
9061f0dc40a274b0a85aa77faf16ce27 *man/MassLysoPEp.Rd
2c64cc82ced2e16a6ac656b40bcc919f *man/MassLysoPG.Rd
d22a66b53ad8c8a80739bda9669ce8a6 *man/MassLysoPI.Rd
b1d881e1770e6f867eeb23fe26e87028 *man/MassLysoPS.Rd
74c19c650d6ae2c3193b82f3f74d723c *man/MassMG.Rd
520716a318fba0f1b9868ecc80ea16fb *man/MassPA.Rd
7be9a38a0cf69ef23f81191d578bfe43 *man/MassPC.Rd
98f5f2ab7dbc7e22c6fbeb9dc3b84c4b *man/MassPCo.Rd
2e2648c2c9246b4bebba5b5ab93e8756 *man/MassPCp.Rd
0ac9b33f1447c79a961ba3c6cae03773 *man/MassPE.Rd
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ce4905ceaea9a04b358b45909d221e90 *man/MassPEp.Rd
2512a352e3571bdc9b755288264bf05f *man/MassPG.Rd
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f9b9b65ecf1486a07b3cc1bd965726ac *man/MassPIP.Rd
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7262c0a19bb36d86a28c37a44f432bec *man/MassPIP3.Rd
6048fb520d793aad86726af11de2a743 *man/MassPS.Rd
f1af213871346dd79588b7edbecb84d5 *man/MassSM.Rd
a43a6bdbaf7619b56f8855f02f954a41 *man/MassSph.Rd
67012b84173c48d54820448012f32c5d *man/MassSphP.Rd
f60c27899955b5c0c6beed4fc79ce477 *man/MassTG.Rd
28b9d3d827a105d9d5e04ca96bfe4310 *man/acylcerdb.Rd
a2841c506a120e908f5423f3ecc20f45 *man/adductsTable.Rd
1133625d252ecdc4ca6858ad7e39afd7 *man/alignmsbatch.Rd
b375b80cad59ae8648dd0e0c88709d55 *man/annotateIsotopes.Rd
4af55bce9d9ff4d6518c82a1eaa624ba *man/annotatemsbatch.Rd
ef21d9ce3c4b51c3193de308fc62b466 *man/assignDB.Rd
8eb724b46db157a092df270ec9ea45cf *man/baconjdb.Rd
3943b97d5cdec0491f924b4172b74de7 *man/badb.Rd
dfa5feae4594a099d421e932ab05b43a *man/batchdataProcessing.Rd
d4aef52985637b7e24ac3361f093fe96 *man/carnitinesdb.Rd
527a44bf6cb691f7caa9a30356e2b475 *man/cbs.Rd
7b13ccf7ec54348869724444f129e549 *man/cerPdb.Rd
6fccae6944eebefb168cd8d6687bcb37 *man/cerdb.Rd
978e6d5077993925a5319460e72bd662 *man/chainFrags.Rd
ce67fd7f8da407d5aa3bf9b992210205 *man/chains.Rd
9564ee4765ddf2e0f59af3a64c696bcc *man/checkClass.Rd
324cf74cbf98662606268456ffb6c7dd *man/checkIntRules.Rd
e163b2cb639a02989726caea51032583 *man/checkIntensityRules.Rd
79aa8dffa1802981f46d24402c4365d5 *man/cldb.Rd
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e901e857cef3aeaae626913cf19a85dd *man/clustdist.Rd
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7a1947888fc9404de3da78623eefb0b1 *man/coelutionScore.Rd
7f142995cb3e6fa9cab4b21447a2acb2 *man/combineChains.Rd
6beb90a46e2f0934e7363a8a0a1e601b *man/combineClassesAdducts.Rd
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ce1094189f5fef3ad7106b81720879b7 *man/createLipidDB.Rd
cb350d55dc17e279ef4691ff0d1dd0f4 *man/crossAdducts.Rd
7c0b2f9509cb45fca64db582b2e0cc45 *man/crossTables.Rd
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347f3958e2ce8a18d4b52669c5fe15a6 *man/dbFourChains.Rd
91eb2e982411e76cda45187cfdcdab2a *man/dbOneChain.Rd
f371f56a57f100e4ca69c4a99333d8bf *man/dbPlasmalogens.Rd
6bf208013de0050656898efbf95fab36 *man/dbSphingolipids.Rd
9a2a64e4023459abcb6eb43a76ae9457 *man/dbThreeChains.Rd
c7be55f429e2ee47c7f326bd3560c0e2 *man/dbTwoChains.Rd
1c692281a9047f4cddcfd9d4dbb9cc39 *man/dbsAdducts.Rd
43cfba3f2b1850bef0300a7841ca2c4f *man/ddaFrags.Rd
663dba2f6ee3afe0e3077faf2ce87b23 *man/dgdb.Rd
5ad511c827a04b6565446860f8522caf *man/diffcb.Rd
8dbbf14d8299935d582fe93f34896f93 *man/dot-with_future_plan.Rd
0aeb070836aede4a3237073b8cbd225f *man/fadb.Rd
fa1eadf52275ae4feda1fcc7b339f463 *man/fahfadb.Rd
6b1dce1972b4f02c6660dd528ad2e496 *man/fillpeaksmsbatch.Rd
b87f87303a9822ac71cd9b6bc6abf54a *man/filtermsms.Rd
e2cfc95b1dd3db619befb7b532256e0d *man/filtrateAdducts.Rd
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39cc95d5318e944d35349f3e5e61d158 *man/findMS2precursor.Rd
689719f0d8d62edb3681be88296d3f20 *man/findPrecursor.Rd
dbbee84d7ce709721822a0482711dace *man/frags.Rd
310b3371b0bfd337bdde30f52255402f *man/getFormula.Rd
40b740da7d797f07825a1cce50b506c4 *man/getInclusionList.Rd
0a3f36ecaf16d9096b87088b37dd46ea *man/getallpeaks.Rd
40f96db106bb05a2263182f9de9629be *man/getfeaturestable.Rd
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70d844d80be3cd528e7af2d8dfa3d79f *man/hfadb.Rd
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475566f5ea98c99ac4a26f16efc47fbf *man/idCEpos.Rd
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4b10c5f503c2490a38a0f8b5e2231690 *man/idCarpos.Rd
eb136bbdf996613ec388893ec2645a03 *man/idCerPneg.Rd
67f171aa010321b0f0825334a46888c7 *man/idCerPpos.Rd
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14133fe97756fe44b5b82a6cf5ee343d *man/idCerpos.Rd
94b7a24ead349028b7774d009d41e792 *man/idDGpos.Rd
eb004da81c196c70c65223a703984394 *man/idFAHFAneg.Rd
69d2532bd27bb7b9c4c035c82c5bc13e *man/idFAneg.Rd
1c01257395d558d0b079bc41129edf66 *man/idLPCneg.Rd
86145a8dba561b75a9e2017a6c3023b6 *man/idLPCpos.Rd
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87008f97f660cfc68fc088505b0bda93 *man/idLPIneg.Rd
38502b894ab1d1123c820c714fb87da7 *man/idLPSneg.Rd
2071fa4e1437539de7d70695c5b315bd *man/idMGpos.Rd
08132dd646a0c717791b99dc19f61a09 *man/idNEG.Rd
f8f56fdef8b47fa83ca52c6262eb330f *man/idPCneg.Rd
6c50ca86af0eefcc1b684c50046c637a *man/idPConeg.Rd
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35f2f2c0b4073f8ef081371646a26ca8 *man/idPCppos.Rd
60e7a0a7701437b69e6d770672caa2a6 *man/idPEneg.Rd
9c35cd8e089b534d61dd8958efb84966 *man/idPEoneg.Rd
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8a456642f9cdc863cbfc9f0a19001d99 *man/idPEppos.Rd
8b1c72d4a00f786caaae444c3cc68c82 *man/idPGneg.Rd
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71db4df8fe57ab9c9d5583ab2b0ab9a7 *man/idPIneg.Rd
76caef51d033f67a76f59ed671ccc510 *man/idPIpos.Rd
90a1630a632164a6a3cd43853cdf5f0b *man/idPOS.Rd
e5cd48b947f47acb1d97bc60ea522ac9 *man/idPSneg.Rd
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4221b789e93e3310a25a61deba1b1784 *man/idSphPneg.Rd
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1b0b828d8067333c109f7497cadd3dab *man/idTGpos.Rd
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953c2fbcf9e94104c954238bb4951c1e *man/joinfrags.Rd
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27e5ff3c2d00008463da4a6915d673b3 *man/pidb.Rd
ecdcb6072e8187045ece044e44d62a64 *man/plotLipids.Rd
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6a2060bc25b6ff1cd46239d8ca2f6795 *man/plotticmsbatch.Rd
a35c1592f49f8ef6c544b082d794cdd4 *man/psdb.Rd
f46bd9b926c61792545242b62c7d4a61 *man/readFileLipidClasses.Rd
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58662e377ff2e647a9b237e1ab2825c1 *man/removeduplicatedpeaks.Rd
0ed8002f4abd628eaee048560e4a7934 *man/rtcorrection.Rd
da33a0ea2c69d40d45087d046774b48f *man/rtdevplot.Rd
089984a5e6e9a5c8de85ab8b300a1f83 *man/searchIsotopes.Rd
b45c6659eeaf3942512909ef43ca4272 *man/searchIsotopesmsbatch.Rd
02ad52404fd638129b0e6ffc7dbd8421 *man/select.Rd
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1d6063fe720d981b91fe8de70cbb107f *man/smdb.Rd
1b22497e3749cfd63df21f610d5319a7 *man/sphPdb.Rd
f9bfe6e21807552ef4f4562bf2e8d2a8 *man/sphdb.Rd
5cbae79e81be6717940d70cdf24362a1 *man/sumChains.Rd
d1aa2c343107df77f830169f8d1de6d8 *man/tgdb.Rd
1bdc7c8929d3d9040be98d3d12a1b046 *src/Peakpicking.cpp
b76426f5d0122c1ffd09fc4239d01a20 *src/auxPeakPicking.h
fa2916bd6fd5f7e0964c0b6ef203449a *src/clustdist.cpp
11fc9d76c9c66acbaa3051a653c718b3 *src/init.c
2d3b2b4e0b3ae1a25dcddd178d18433f *vignettes/abstract2.png
c483d602186016e2424979ce09b93fef *vignettes/vignette.Rmd
6a07fdc11dc92cf2b34cbbbc99e33faf *vignettes/workflow.png
