Last updated on 2026-03-08 04:50:10 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| ClusterGVis | 1 | 2 | 11 |
| GseaVis | 4 | 10 | |
| transPlotR | 14 |
Current CRAN status: ERROR: 1, NOTE: 2, OK: 11
Version: 0.1.4
Check: package dependencies
Result: ERROR
Package required but not available: ‘SingleCellExperiment’
Packages suggested but not available for checking:
'clusterProfiler', 'SummarizedExperiment', 'TCseq'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.4
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘TCseq’
Flavor: r-oldrel-macos-arm64
Version: 0.1.4
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'TCseq', 'monocle'
Flavor: r-oldrel-macos-x86_64
Current CRAN status: ERROR: 4, OK: 10
Version: 0.0.5
Check: package dependencies
Result: ERROR
Package required but not available: ‘DOSE’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.0.5
Check: examples
Result: ERROR
Running examples in ‘GseaVis-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gseaNb
> ### Title: gseaNb
> ### Aliases: gseaNb
>
> ### ** Examples
>
> # load data
> test_data <- system.file("extdata", "gseaRes.RDS", package = "GseaVis")
> gseaRes <- readRDS(test_data)
>
> # all plot
> gseaNb(object = gseaRes,
+ geneSetID = 'GOBP_NUCLEOSIDE_DIPHOSPHATE_METABOLIC_PROCESS',
+ subPlot = 2)
Error in `map()`:
ℹ In index: 1.
Caused by error in `get()`:
! object 'gseaScores' not found
Backtrace:
▆
1. ├─GseaVis::gseaNb(...)
2. │ └─purrr::map_df(...)
3. │ └─purrr::map(.x, .f, ...)
4. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
5. │ ├─purrr:::with_indexed_errors(...)
6. │ │ └─base::withCallingHandlers(...)
7. │ ├─purrr:::call_with_cleanup(...)
8. │ └─GseaVis (local) .f(.x[[i]], ...)
9. │ ├─gsInfo(object, geneSetID = setid) %>% dplyr::mutate(id = setid)
10. │ └─GseaVis::gsInfo(object, geneSetID = setid)
11. │ └─utils::getFromNamespace("gseaScores", "DOSE")
12. │ └─base::get(x, envir = ns, inherits = FALSE)
13. ├─dplyr::mutate(., id = setid)
14. └─base::.handleSimpleError(...)
15. └─purrr (local) h(simpleError(msg, call))
16. └─cli::cli_abort(...)
17. └─rlang::abort(...)
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.0.5
Check: examples
Result: ERROR
Running examples in ‘GseaVis-Ex.R’ failed
The error most likely occurred in:
> ### Name: gseaNb
> ### Title: gseaNb
> ### Aliases: gseaNb
>
> ### ** Examples
>
> # load data
> test_data <- system.file("extdata", "gseaRes.RDS", package = "GseaVis")
> gseaRes <- readRDS(test_data)
>
> # all plot
> gseaNb(object = gseaRes,
+ geneSetID = 'GOBP_NUCLEOSIDE_DIPHOSPHATE_METABOLIC_PROCESS',
+ subPlot = 2)
Error in `map()`:
ℹ In index: 1.
Caused by error in `get()`:
! object 'gseaScores' not found
Backtrace:
▆
1. ├─GseaVis::gseaNb(...)
2. │ └─purrr::map_df(...)
3. │ └─purrr::map(.x, .f, ...)
4. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
5. │ ├─purrr:::with_indexed_errors(...)
6. │ │ └─base::withCallingHandlers(...)
7. │ ├─purrr:::call_with_cleanup(...)
8. │ └─GseaVis (local) .f(.x[[i]], ...)
9. │ ├─gsInfo(object, geneSetID = setid) %>% dplyr::mutate(id = setid)
10. │ └─GseaVis::gsInfo(object, geneSetID = setid)
11. │ └─utils::getFromNamespace("gseaScores", "DOSE")
12. │ └─base::get(x, envir = ns, inherits = FALSE)
13. ├─dplyr::mutate(., id = setid)
14. └─base::.handleSimpleError(...)
15. └─purrr (local) h(simpleError(msg, call))
16. └─cli::cli_abort(...)
17. └─rlang::abort(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 14