Last updated on 2024-08-25 05:49:36 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 2.1.0 | 53.14 | 449.02 | 502.16 | NOTE | |
r-devel-linux-x86_64-debian-gcc | 2.1.0 | 36.23 | 301.27 | 337.50 | NOTE | |
r-devel-linux-x86_64-fedora-clang | 2.1.0 | 853.41 | NOTE | |||
r-devel-linux-x86_64-fedora-gcc | 2.1.0 | 819.39 | NOTE | |||
r-devel-windows-x86_64 | 2.1.0 | 52.00 | 395.00 | 447.00 | NOTE | |
r-patched-linux-x86_64 | 2.1.0 | 58.71 | 420.28 | 478.99 | NOTE | |
r-release-linux-x86_64 | 2.1.0 | 52.13 | 424.98 | 477.11 | NOTE | |
r-release-macos-arm64 | 2.1.0 | 192.00 | NOTE | |||
r-release-macos-x86_64 | 2.1.0 | 406.00 | NOTE | |||
r-release-windows-x86_64 | 2.1.0 | 53.00 | 392.00 | 445.00 | NOTE | |
r-oldrel-macos-arm64 | 2.1.0 | 234.00 | ERROR | |||
r-oldrel-macos-x86_64 | 2.1.0 | 605.00 | ERROR | |||
r-oldrel-windows-x86_64 | 2.1.0 | 74.00 | 720.00 | 794.00 | NOTE |
Version: 2.1.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘NLMR’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.1.0
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
SpaDES.core-package.Rd: copy, equalExtent, getColors,
divergentColors, layerNames, numLayers, Plot, clearPlot,
clickValues, clickExtent, clickCoordinates, dev, newPlot, rePlot
depsLoadOrder.Rd: igraph
downloadData.Rd: prepInputs
emptyEventList.Rd: data.table
moduleDiagram.Rd: igraph
moduleGraph.Rd: igraph
simList-accessors-events.Rd: data.table
simList-class.Rd: data.table
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 2.1.0
Check: installed package size
Result: NOTE
installed size is 6.8Mb
sub-directories of 1Mb or more:
R 5.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.1.0
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘ii-modules.Rmd’
...
restartSpades()
The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-92167-1
Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in
SpaDES.core:::savedSimEnv()$.sim
It will be deleted on next call to spades().
When sourcing ‘ii-modules.R’:
Error: Package 'NLMR' not available. Please install it using:
install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev')
Execution halted
when running code in ‘iii-cache.Rmd’
...
The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-92167-1
Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in
SpaDES.core:::savedSimEnv()$.sim
It will be deleted on next call to spades().
Timing stopped at: 0.189 0.016 0.277
When sourcing ‘iii-cache.R’:
Error: Package 'NLMR' not available. Please install it using:
install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev')
Execution halted
‘i-introduction.Rmd’ using ‘UTF-8’... [2s/3s] OK
‘ii-modules.Rmd’ using ‘UTF-8’... failed
‘iii-cache.Rmd’ using ‘UTF-8’... failed
‘iv-advanced.Rmd’ using ‘UTF-8’... [0s/1s] OK
‘v-automated-testing.Rmd’ using ‘UTF-8’... [0s/0s] OK
Flavor: r-oldrel-macos-arm64
Version: 2.1.0
Check: tests
Result: ERROR
Running ‘test-all.R’ [56s/126s]
Running the tests in ‘tests/test-all.R’ failed.
Last 13 lines of output:
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-simulation.R:700:3'): messaging with multiple modules ──────────
Error in `writeLines(whisker.render(moduleTemplate, moduleData), filenameR)`: Error writing to connection: No space left on device
Backtrace:
▆
1. ├─SpaDES.core::newModule(m1, tmpdir, open = FALSE) at test-simulation.R:700:3
2. └─SpaDES.core::newModule(m1, tmpdir, open = FALSE)
3. ├─base::do.call(...)
4. ├─SpaDES.core (local) `<nnstndGF>`(...)
5. └─SpaDES.core (local) `<nnstndGF>`(...)
6. └─base::writeLines(...)
[ FAIL 1 | WARN 2 | SKIP 50 | PASS 227 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 2.1.0
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘ii-modules.Rmd’
...
restartSpades()
The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-98058-1
Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in
SpaDES.core:::savedSimEnv()$.sim
It will be deleted on next call to spades().
When sourcing ‘ii-modules.R’:
Error: Package 'NLMR' not available. Please install it using:
install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev')
Execution halted
when running code in ‘iii-cache.Rmd’
...
The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-98058-1
Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in
SpaDES.core:::savedSimEnv()$.sim
It will be deleted on next call to spades().
Timing stopped at: 0.333 0.031 0.731
When sourcing ‘iii-cache.R’:
Error: Package 'NLMR' not available. Please install it using:
install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev')
Execution halted
‘i-introduction.Rmd’ using ‘UTF-8’... [4s/5s] OK
‘ii-modules.Rmd’ using ‘UTF-8’... failed
‘iii-cache.Rmd’ using ‘UTF-8’... failed
‘iv-advanced.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘v-automated-testing.Rmd’ using ‘UTF-8’... [0s/1s] OK
Flavor: r-oldrel-macos-x86_64
Version: 2.1.0
Check: re-building of vignette outputs
Result: NOTE
Error(s) in re-building vignettes:
...
--- re-building ‘i-introduction.Rmd’ using rmarkdown
--- finished re-building ‘i-introduction.Rmd’
--- re-building ‘ii-modules.Rmd’ using rmarkdown
--- finished re-building ‘ii-modules.Rmd’
--- re-building ‘iv-advanced.Rmd’ using rmarkdown
--- finished re-building ‘iv-advanced.Rmd’
--- re-building ‘v-automated-testing.Rmd’ using rmarkdown
--- finished re-building ‘v-automated-testing.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-x86_64