Last updated on 2026-03-07 04:50:22 CET.
| Package | ERROR | OK |
|---|---|---|
| breakaway | 3 | 11 |
| corncob | 3 | 11 |
| rigr | 1 | 13 |
Current CRAN status: ERROR: 3, OK: 11
Version: 4.8.4
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Amy D Willis <adwillis@uw.edu>’
The Description field contains
<doi:10.1111/rssc.12206>, and Willis (2016) <arXiv:1604.02598>, as well
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 4.8.4
Check: package dependencies
Result: ERROR
Package required but not available: ‘phyloseq’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Current CRAN status: ERROR: 3, OK: 11
Version: 0.4.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘corncob-intro-no-phyloseq.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘corncob-intro-no-phyloseq.Rmd’
--- re-building ‘corncob-intro.Rmd’ using rmarkdown
Quitting from corncob-intro.Rmd:173-176 [unnamed-chunk-18]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! object 'corncob' not found
---
Backtrace:
▆
1. └─base::plot(corncob, color = "DayAmdmt", B = 50, data_only = TRUE)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'corncob-intro.Rmd' failed with diagnostics:
object 'corncob' not found
--- failed re-building ‘corncob-intro.Rmd’
SUMMARY: processing the following file failed:
‘corncob-intro.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Current CRAN status: ERROR: 1, OK: 13
Version: 1.0.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/17s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rigr)
rigr version 1.0.8: Regression, Inference, and General Data Analysis Tools in R
> library(car)
Loading required package: carData
>
> test_check("rigr")
Saving _problems/test_wilcoxon-691.R
Saving _problems/test_wilcoxon-715.R
Saving _problems/test_wilcoxon-739.R
Saving _problems/test_wilcoxon-749.R
Saving _problems/test_wilcoxon-766.R
[ FAIL 5 | WARN 0 | SKIP 0 | PASS 2324 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_wilcoxon.R:691:3'): wilcoxon() returns correct numbers for one-sample exact test ──
Expected `wil1$conf.int` to equal `wil2$conf.int`.
Differences:
`attr(actual, 'conf.level')`: 0.95000
`attr(expected, 'conf.level')`: 0.95045
── Failure ('test_wilcoxon.R:715:3'): wilcoxon() returns correct numbers for one-sample exact test (left) ──
Expected `wil1$conf.int` to equal `wil2$conf.int`.
Differences:
`attr(actual, 'conf.level')`: 0.95000
`attr(expected, 'conf.level')`: 0.95057
── Failure ('test_wilcoxon.R:739:3'): wilcoxon() returns correct numbers for one-sample exact test (right) ──
Expected `wil1$conf.int` to equal `wil2$conf.int`.
Differences:
`attr(actual, 'conf.level')`: 0.95000
`attr(expected, 'conf.level')`: 0.95057
── Failure ('test_wilcoxon.R:749:3'): wilcoxon() returns correct CIs other than 95% (exact) ──
Expected `wil1$conf.int` to equal `wil2$conf.int`.
Differences:
`attr(actual, 'conf.level')`: 0.80000
`attr(expected, 'conf.level')`: 0.80053
── Failure ('test_wilcoxon.R:766:3'): wilcoxon() returns correct inference for non-0 null (exact) ──
Expected `wil1$conf.int` to equal `wil2$conf.int`.
Differences:
`attr(actual, 'conf.level')`: 0.95000
`attr(expected, 'conf.level')`: 0.95045
[ FAIL 5 | WARN 0 | SKIP 0 | PASS 2324 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc