Last updated on 2025-12-07 04:49:53 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.3 | 10.25 | 198.47 | 208.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.0.3 | 0.30 | 2.31 | 2.61 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.0.3 | 23.00 | 302.43 | 325.43 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.0.3 | 26.00 | 302.60 | 328.60 | OK | |
| r-devel-windows-x86_64 | 0.0.3 | 11.00 | 205.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 0.0.3 | 10.51 | 199.14 | 209.65 | OK | |
| r-release-linux-x86_64 | 0.0.3 | 10.50 | 197.65 | 208.15 | OK | |
| r-release-macos-arm64 | 0.0.3 | 3.00 | 69.00 | 72.00 | ERROR | |
| r-release-macos-x86_64 | 0.0.3 | 8.00 | 76.00 | 84.00 | OK | |
| r-release-windows-x86_64 | 0.0.3 | 12.00 | 201.00 | 213.00 | OK | |
| r-oldrel-macos-arm64 | 0.0.3 | 3.00 | 75.00 | 78.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.0.3 | 14.00 | 240.00 | 254.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.0.3 | 15.00 | 254.00 | 269.00 | OK |
Version: 0.0.3
Check: package dependencies
Result: ERROR
Package required but not available: ‘gap’
Packages suggested but not available for checking:
'bookdown', 'EnsDb.Hsapiens.v75', 'ensembldb', 'haplo.stats',
'kableExtra', 'knitr', 'SNPassoc'
VignetteBuilder package required for checking but not installed: ‘knitr’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.0.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:409-415 [ensdb]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `h()`:
! error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
---
Backtrace:
▆
1. ├─ensembldb::metadata(EnsDb.Hsapiens.v75)
2. └─base::.handleSimpleError(...)
3. └─base (local) h(simpleError(msg, call))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.0.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64