Last updated on 2025-12-07 04:49:58 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 250.38 | 264.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.69 | 184.08 | 193.77 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 184.00 | 202.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.70 | 287.77 | 303.47 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 251.46 | 265.62 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 199.00 | 211.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 15.00 | 210.00 | 225.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/147s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.622, system: 0.041, elapsed: 2.768 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.524, system: 0.074, elapsed: 14.558 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.013, elapsed: 0.346 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.973, system: 0.194, elapsed: 6.677 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.301 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.088, system: 0.362, elapsed: 25.670 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.031, elapsed: 2.523 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.499, system: 0.078, elapsed: 15.938 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.012, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.085, system: 0.191, elapsed: 6.986 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.073, system: 0.358, elapsed: 27.075 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.036, elapsed: 2.708 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.581, system: 0.092, elapsed: 17.413 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.012, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.973, system: 0.196, elapsed: 6.296 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.256 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.230, system: 0.234, elapsed: 1.231 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.429, system: 0.618, elapsed: 29.359 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.044, elapsed: 2.930 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.453, system: 0.067, elapsed: 24.505 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.473 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.883, system: 0.174, elapsed: 8.193 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.383 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.797, system: 0.449, elapsed: 18.199 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.760, system: 0.775, elapsed: 56.050 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/153s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.037, elapsed: 3.040 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.503, system: 0.074, elapsed: 18.888 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.463 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.808, system: 0.214, elapsed: 8.172 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.803, system: 0.363, elapsed: 31.825 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.633, system: 0.040, elapsed: 2.740 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.776, system: 0.078, elapsed: 16.563 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.807, system: 0.172, elapsed: 6.483 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.141, system: 0.335, elapsed: 27.435 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.592, system: 0.030, elapsed: 2.708 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.627, system: 0.090, elapsed: 17.884 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.354 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.796, system: 0.179, elapsed: 7.509 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.346 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.156, system: 0.248, elapsed: 1.317 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.195, system: 0.605, elapsed: 31.378 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.036, elapsed: 2.816 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.672, system: 0.081, elapsed: 17.856 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.013, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.730, system: 0.184, elapsed: 6.258 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.276 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.667, system: 0.495, elapsed: 24.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.643, system: 0.836, elapsed: 52.946 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64