Last updated on 2025-07-08 05:49:38 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.75 | 263.18 | 273.93 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 365.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 174.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 184.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 157.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/124s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.523, system: 0.055, elapsed: 1.899 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.927, system: 0.119, elapsed: 10.617 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.702, system: 0.185, elapsed: 5.191 seconds]
Computing values for grid cells...
... done. [user: 0.154, system: 0.003, elapsed: 0.158 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.027, system: 0.399, elapsed: 18.826 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.391, system: 0.030, elapsed: 1.582 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.024, system: 0.082, elapsed: 13.016 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.011, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.795, system: 0.178, elapsed: 6.576 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.332 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.138, system: 0.320, elapsed: 22.566 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.035, elapsed: 2.574 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.013, system: 0.087, elapsed: 15.468 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.728, system: 0.191, elapsed: 6.244 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.247 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.149, system: 0.220, elapsed: 1.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.412, system: 0.572, elapsed: 27.160 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.440, system: 0.034, elapsed: 2.044 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.959, system: 0.071, elapsed: 20.965 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.498 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.801, system: 0.182, elapsed: 8.872 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.356 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.302, system: 0.461, elapsed: 15.511 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.502, system: 0.796, elapsed: 49.563 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/101s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.492, system: 0.039, elapsed: 1.600 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.279, system: 0.043, elapsed: 9.013 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.294 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.198, elapsed: 5.893 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.219 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.296, system: 0.313, elapsed: 17.710 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.034, elapsed: 2.133 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.027, system: 0.061, elapsed: 14.297 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.502, system: 0.167, elapsed: 5.242 seconds]
Computing values for grid cells...
... done. [user: 0.154, system: 0.003, elapsed: 0.218 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.901, system: 0.295, elapsed: 22.960 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.026, elapsed: 2.493 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.933, system: 0.063, elapsed: 12.238 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.507, system: 0.170, elapsed: 5.354 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.250 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.089, system: 0.261, elapsed: 1.016 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.050, system: 0.557, elapsed: 22.597 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.552, system: 0.043, elapsed: 2.283 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.030, system: 0.056, elapsed: 10.707 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.503, system: 0.159, elapsed: 4.114 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.206 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.260, system: 0.585, elapsed: 13.203 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.380, system: 0.888, elapsed: 31.735 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64