Last updated on 2025-10-25 05:50:07 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.13 | 252.16 | 265.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.03 | 225.22 | 235.25 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 58.00 | 285.70 | 343.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.69 | 272.97 | 288.66 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 23.00 | 366.00 | 389.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 20.00 | 375.00 | 395.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/289s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.857, system: 0.133, elapsed: 5.366 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.750, system: 0.495, elapsed: 30.786 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.031, elapsed: 0.574 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.241, system: 0.467, elapsed: 14.583 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.014, elapsed: 0.539 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.951, system: 1.595, elapsed: 55.064 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.674, system: 0.117, elapsed: 4.095 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.914, system: 0.676, elapsed: 24.080 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.038, elapsed: 0.755 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.267, system: 0.435, elapsed: 13.273 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.016, elapsed: 0.670 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.927, system: 1.631, elapsed: 45.987 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.867, system: 0.123, elapsed: 5.199 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.663, system: 0.406, elapsed: 36.936 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.035, elapsed: 0.603 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.255, system: 0.423, elapsed: 13.067 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.489 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.274, system: 0.325, elapsed: 2.519 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.173, system: 1.620, elapsed: 61.492 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.761, system: 0.125, elapsed: 5.241 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.681, system: 0.407, elapsed: 36.797 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.037, elapsed: 1.140 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.179, system: 0.412, elapsed: 19.397 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.008, elapsed: 0.589 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.358, system: 1.147, elapsed: 44.457 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.168, system: 2.620, elapsed: 112.552 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/278s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.911, system: 0.158, elapsed: 6.886 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.747, system: 0.524, elapsed: 30.428 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.030, elapsed: 0.538 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.880, system: 0.406, elapsed: 9.984 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.028, elapsed: 0.772 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.603, system: 1.474, elapsed: 51.456 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.002, system: 0.183, elapsed: 6.863 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.752, system: 0.532, elapsed: 29.415 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.036, elapsed: 0.769 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.195, system: 0.448, elapsed: 13.714 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.024, elapsed: 0.438 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.033, system: 1.618, elapsed: 54.493 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.854, system: 0.140, elapsed: 4.589 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.636, system: 0.424, elapsed: 30.152 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.032, elapsed: 0.766 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.177, system: 0.463, elapsed: 18.161 seconds]
Computing values for grid cells...
... done. [user: 0.199, system: 0.032, elapsed: 0.540 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.216, system: 0.384, elapsed: 2.262 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.067, system: 1.983, elapsed: 59.710 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.079, elapsed: 3.880 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.602, system: 0.356, elapsed: 25.426 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.035, elapsed: 0.593 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.105, system: 0.438, elapsed: 12.664 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.021, elapsed: 0.781 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.301, system: 1.221, elapsed: 47.293 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.871, system: 2.514, elapsed: 93.742 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64