Last updated on 2025-07-31 05:54:04 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 252.26 | 264.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.43 | 234.54 | 244.97 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 166.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 281.00 | 305.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/112s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.040, elapsed: 2.407 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.840, system: 0.069, elapsed: 13.295 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.714, system: 0.177, elapsed: 5.401 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.250 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.969, system: 0.327, elapsed: 22.455 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.433, system: 0.028, elapsed: 2.247 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.021, system: 0.084, elapsed: 13.342 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.411 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.773, system: 0.176, elapsed: 5.982 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.269 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.127, system: 0.324, elapsed: 23.184 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.033, elapsed: 2.721 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.984, system: 0.093, elapsed: 12.844 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.219 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.654, system: 0.180, elapsed: 4.957 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.243 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.171, system: 0.217, elapsed: 1.090 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.360, system: 0.564, elapsed: 23.070 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.030, elapsed: 2.094 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.130, system: 0.127, elapsed: 12.775 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.015, elapsed: 0.209 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.653, system: 0.218, elapsed: 4.758 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.008, elapsed: 0.240 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.396, system: 0.592, elapsed: 15.142 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.650, system: 1.023, elapsed: 36.107 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/111s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.039, elapsed: 3.695 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.799, system: 0.055, elapsed: 13.402 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.013, elapsed: 0.255 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.559, system: 0.185, elapsed: 5.972 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.004, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.691, system: 0.309, elapsed: 24.587 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.034, elapsed: 2.410 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.048, system: 0.114, elapsed: 12.826 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.255 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.568, system: 0.168, elapsed: 5.095 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.235 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.998, system: 0.355, elapsed: 21.694 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.553, system: 0.033, elapsed: 2.326 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.077, elapsed: 12.851 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.488, system: 0.158, elapsed: 4.746 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.183 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.071, system: 0.211, elapsed: 0.923 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.038, system: 0.523, elapsed: 22.072 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.540, system: 0.033, elapsed: 2.173 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.953, system: 0.164, elapsed: 11.762 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.011, elapsed: 0.190 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.371, system: 0.211, elapsed: 3.934 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.005, elapsed: 0.219 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.092, system: 0.474, elapsed: 13.811 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.912, system: 0.935, elapsed: 32.960 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64