StAMPP
News
StAMPP 1.6.3 (2021-07-30)
Other changes
StAMPP 1.6.2 (2020-04-22)
Bug fixes
- removed use of temp environment and associated unintentional binding
to base environment
StAMPP 1.6.1 (2020-03-18)
Bug fixes
- fixed error and example data documentation
StAMPP 1.6.0 (2020-03-12)
Other changes
- updated to reflect the new R 4.0.0 default of stringsAsFactors =
FALSE in data.frame() and read.table()
StAMPP 1.5.1 (2017-10-10)
Bug fixes
- bug fixes during bootstrapping Fst calculation if Fst values are
NaN
StAMPP 1.5.0 (2016-10-10)
Bug fixes
- bug fixes during importation of genlight objects
StAMPP 1.4.0 (2015-06-30)
Bug fixes
- fixed format compatibility issues with stamppPhylip and the updated
software program Darwin v6
- bug fixes during importation of polyploid genotype data
StAMPP 1.3.0 (2014-08-25)
Other changes
- updated for compatibility with pegas 0.6
StAMPP 1.2.0 (2014-02-26)
Enhancements
- speed improvements to stamppConvert, stamppNeisD and stamppGmatrix
for large datasets
Bug fixes
- fixed an error in calculating Nei’s genetic distance between
individuals using genotype data imported in ‘freq’ format; – Prior to
this update StAMPP had a bug that when missing data was ecountered it
would print an error to the screen and would not calculate the genetic
distances. This error was only associated with data imported in ‘freq’
format when calculating genetic distances between individuals. Any
results from data analysis in StAMPP were and are still accurate as this
error prevented the calculation of genetic distance and therefore no
incorrect values would have been generated.
- corrected an error in calculating Nei’s genetic distance where
StAMPP did not split the calculation up when using large datasets and
consequently produced a memory allocation error when memory was
limiting.
StAMPP 1.1.0 (2013-06-06)
Other changes
- updated for compatibility with adegenet 1.3-9
StAMPP 1.0.0 (2013-05-29)
First public release.