Original coloc proposal
Giambartolomei C, al e (2014). “Bayesian Test for Colocalisation between Pairs of Genetic Association Studies Using Summary Statistics.” PLOS Genetics. https://doi.org/10.1371/journal.pgen.1004383.
About choosing priors and conditioning
Wallace C (2020). “Eliciting priors and relaxing the single causal variant assumption in colocalisation analyses.” PLOS Genetics. https://doi.org/10.1371/journal.pgen.1008720.
Using SuSiE to accomodate multiple causal variants
Wallace C (2021). “A more accurate method for colocalisation analysis allowing for multiple causal variants.” PLOS Genetics. https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1009440.
Corresponding BibTeX entries:
@Article{, author = {C Giambartolomei and et. al}, title = {Bayesian Test for Colocalisation between Pairs of Genetic Association Studies Using Summary Statistics}, journal = {PLOS Genetics}, year = {2014}, url = {https://doi.org/10.1371/journal.pgen.1004383}, }
@Article{, author = {C Wallace}, title = {{Eliciting priors and relaxing the single causal variant assumption in colocalisation analyses}}, journal = {PLOS Genetics}, year = {2020}, url = {https://doi.org/10.1371/journal.pgen.1008720}, }
@Article{, author = {C Wallace}, title = {{A more accurate method for colocalisation analysis allowing for multiple causal variants}}, journal = {{PLOS Genetics}}, year = {2021}, url = {https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1009440}, }