rncl: An Interface to the Nexus Class Library
An interface to the Nexus Class Library which allows parsing of NEXUS, Newick and other phylogenetic tree file formats. It provides elements of the file that can be used to build phylogenetic objects such as ape's 'phylo' or phylobase's 'phylo4(d)'. This functionality is demonstrated with 'read_newick_phylo()' and 'read_nexus_phylo()'.
| Version: | 0.8.7 |
| Depends: | R (≥ 3.1.1) |
| Imports: | Rcpp (≥ 0.11.0), progress (≥ 1.1.2), stats |
| LinkingTo: | Rcpp, progress |
| Suggests: | testthat, ape |
| Published: | 2023-01-08 |
| DOI: | 10.32614/CRAN.package.rncl |
| Author: | Francois Michonneau
 [aut, cre],
Ben Bolker [aut],
Mark Holder [aut],
Paul Lewis [aut],
Brian O'Meara
[aut] |
| Maintainer: | Francois Michonneau <francois.michonneau at gmail.com> |
| BugReports: | https://github.com/fmichonneau/rncl/issues |
| License: | BSD_2_clause + file LICENSE |
| URL: | https://github.com/fmichonneau/rncl |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| In views: | Phylogenetics |
| CRAN checks: | rncl results |
Documentation:
| Reference manual: | rncl.pdf |
Downloads:
| Package source: | rncl_0.8.7.tar.gz |
| Windows binaries: | r-devel: rncl_0.8.7.zip, r-release: rncl_0.8.7.zip, r-oldrel: rncl_0.8.7.zip |
| macOS binaries: | r-release (arm64): rncl_0.8.7.tgz, r-oldrel (arm64): rncl_0.8.7.tgz, r-release (x86_64): rncl_0.8.7.tgz, r-oldrel (x86_64): rncl_0.8.7.tgz |
| Old sources: | rncl archive |
Reverse dependencies:
| Reverse depends: | CommEcol |
| Reverse imports: | phylobase, rotl |
Linking:
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