gtsummary::tbl_regression() with
tidycmprsk::crr() models, the {tidycmprsk} package must be
loaded (to access the S3 methods below). In the next release of
gtsummary, tidycmprsk will no longer be a dependency.
tbl_regression.tidycrr() method.global_pvalue_fun.tidycrr() method, which changes
the default calculation in
gtsummary::add_global_p(anova_fun) to use the Wald
test.Corrected a previous regression bug and cuminc() can
again handle models with no observed censoring. (#89)
Performance improvements to cuminc(). (@pteridin; #73)
The autoplot() method for cuminc()
objects is now defunct in favor of ggsurvfit::ggcuminc().
(#100)
Updates ahead of the {purrr} v1.0 release.
The autoplot.tidycuminc() method has been deprecated
in favor of ggsurvfit::ggcuminc(). (#81)
Fix in cuminc() when one or more strata levels has
no observations with one of the outcomes observed.
Updated cuminc() and crr() to drop
un-observed factor levels before processing the data. Previously,
un-observed levels led to a singularity error. (#76)
Bug fix in tidy.tidycuminc() when times specified
are after the maximum follow-up time. (#77)
Re-wrote an ifelse() statement to avoid a warning
when tied times are present in cuminc(). (#74)
The "strata" column in tidied cuminc()
results is now a factor. (#62)
Fix in the documentation for tbl_cuminc() that
resulted in a UTF-related error on Debian system R CMD Check.
(#65)
Adding vcov() method for crr() models
(#63)
Adding the tbl_cuminc() function (similar to
gtsummary::tbl_survfit()). Also added related methods,
add_n.tbl_cuminc(), add_nevent.tbl_cuminc(),
add_p.tbl_cuminc(), and
inline_text.tbl_cuminc()
Updated the definition of n.event and
n.censor in tidy.tidycuminc() to match
summary.survfit() when users specify
tidy.tidycuminc(times=). We now report the cumulative
number of events/censors in the interval prior to the specified times.
(#49)
Added crr(conf.level=) and
cuminc(conf.level=) arguments. The tidy data frame returned
with each of these objects now has confidence limits that match
conf.level=. (#45)
The tidy.ticycrr() and
tidy.ticycuminc() conf.level= defaults have
been updated to x$conf.level passed in the original model
call.
Now returning the the number at risk, number of events, and the
number of censored observations in
tidy.tidycuminc().
Updated the default value to
tidy.tidycuminc(conf.int = TRUE) from
FALSE
Update the crr() and cuminc() print
methods for more clarity.
Update documentations for cuminc() method with an
explicit formula for the confidence interval.
Returning the cumulative number of events and the cumulative
number of censored observations in
tidy.tidycuminc().
The autoplot() figure will now display the first
outcome only as default. Previously, all outcomes were shown by
default.