vermeulen: Biomarker Data Set by Vermeulen et al. (2009)
The biomarker data set by Vermeulen et al. (2009) <doi:10.1016/S1470-2045(09)70154-8> is provided. The data source, however, is by Ruijter et al. (2013) <doi:10.1016/j.ymeth.2012.08.011>. The original data set may be downloaded from <https://medischebiologie.nl/wp-content/uploads/2019/02/qpcrdatamethods.zip>. This data set is for a real-time quantitative polymerase chain reaction (PCR) experiment that comprises the raw fluorescence data of 24,576 amplification curves. This data set comprises 59 genes of interest and 5 reference genes. Each gene was assessed on 366 neuroblastoma complementary DNA (cDNA) samples and on 18 standard dilution series samples (10-fold 5-point dilution series x 3 replicates + no template controls (NTC) x 3 replicates).
| Version: | 0.1.2 |
| Depends: | R (≥ 2.10) |
| Imports: | memoise |
| Suggests: | dplyr, ggplot2, rmarkdown, spelling, testthat (≥ 3.0.0), tibble |
| Published: | 2024-04-22 |
| DOI: | 10.32614/CRAN.package.vermeulen |
| Author: | Ramiro Magno 
[aut, cre],
Pattern Institute [cph, fnd] |
| Maintainer: | Ramiro Magno <rmagno at pattern.institute> |
| BugReports: | https://github.com/ramiromagno/vermeulen/issues |
| License: | CC BY 4.0 |
| URL: | https://github.com/ramiromagno/vermeulen, https://rmagno.eu/vermeulen/ |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | README NEWS |
| CRAN checks: | vermeulen results |
Documentation:
| Reference manual: | vermeulen.pdf |
Downloads:
| Package source: | vermeulen_0.1.2.tar.gz |
| Windows binaries: | r-devel: vermeulen_0.1.2.zip, r-release: vermeulen_0.1.2.zip, r-oldrel: vermeulen_0.1.2.zip |
| macOS binaries: | r-release (arm64): vermeulen_0.1.2.tgz, r-oldrel (arm64): vermeulen_0.1.2.tgz, r-release (x86_64): vermeulen_0.1.2.tgz, r-oldrel (x86_64): vermeulen_0.1.2.tgz |
| Old sources: | vermeulen archive |
Linking:
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