Last updated on 2025-07-01 05:49:57 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [62s/102s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.480, system: 0.044, elapsed: 2.004 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.934, system: 0.126, elapsed: 11.674 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.645, system: 0.176, elapsed: 4.374 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.949, system: 0.387, elapsed: 19.400 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.512, system: 0.039, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.011, system: 0.091, elapsed: 12.703 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.768, system: 0.165, elapsed: 5.559 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.006, elapsed: 0.252 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.178, system: 0.334, elapsed: 22.117 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.541, system: 0.032, elapsed: 2.722 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.980, system: 0.082, elapsed: 15.475 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.345 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.714, system: 0.169, elapsed: 6.038 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.240 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.109, system: 0.472, elapsed: 26.623 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.348, system: 0.796, elapsed: 52.439 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [60s/85s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.399, system: 0.034, elapsed: 1.476 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.473, system: 0.063, elapsed: 9.081 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.177, system: 0.012, elapsed: 0.191 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.324, system: 0.160, elapsed: 3.549 seconds]
Computing values for grid cells...
... done. [user: 0.148, system: 0.003, elapsed: 0.153 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.022, system: 0.288, elapsed: 14.968 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.446, system: 0.028, elapsed: 1.753 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.104, system: 0.096, elapsed: 13.980 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.571, system: 0.166, elapsed: 5.998 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.974, system: 0.325, elapsed: 23.073 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.585, system: 0.034, elapsed: 2.750 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.010, system: 0.081, elapsed: 15.197 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.544, system: 0.166, elapsed: 5.926 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.269 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.944, system: 0.457, elapsed: 14.196 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.058, system: 0.777, elapsed: 39.668 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64